Imports expression data based on sample name specified in
sample_key. It takes sample
sample_key and tries to match the name in
sample_list. For final
output, results are merged based on shRNA.
A data.frame with columns sample_name, <groups>* and replicate. Number of columns for groups may vary.
Character. Vector of absolute or relative paths to sample count matrices. If NULL, subfolder ./data is search for all files ending in .txt.
A data.frame of shRNA counts for selected samples.
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