countClassified: Count classified results

Description Usage Arguments Value

View source: R/doDE_helper_functions.R

Description

For each contrast, count how many times neutral, lethal or beneficial species comes up.

Usage

1
countClassified(count, ctr, overall_ctr, classy)

Arguments

count

Data.frame

ctr

Data.frame of contrasts for which counting should be done.

overall_ctr

Data.frame of overall contrasts.

classy

Which classification to count. Possible options are lethal and beneficial.

Value

Matrix of counts where rows are genes and columns are contrasts.


genialis/shRNAde documentation built on Dec. 11, 2018, 1:34 a.m.