makeLibrary: Create library of shRNA
In genialis/shRNAde: Functions needed to support the shRNA pipeline in rewolwe-bio
Description
Usage
Arguments
Value
Description
Take a raw file and convert it to a valid fasta format. This file is necessary for performing
alignment.
Usage
1
makeLibrary(input, output = NULL)
Arguments
input
A raw file of three columns where first value is shRNA, second value is gene
name and third value is sequence.
output
Character. Optional. If a character string of length one is supplied, it is
stripped of file extension and appended fasta. If NULL, name of input is used,
where .fasta extension is appended and written to working directory.
Value
Returns link to file of the library, which has been written to working directory or
path specified in output as a side effect.
genialis/shRNAde documentation built on May 3, 2019, 7:39 p.m.
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Description Usage Arguments Value
Description
Take a raw file and convert it to a valid fasta format. This file is necessary for performing alignment.
Usage
1 | makeLibrary(input, output = NULL)
|
Arguments
input |
A raw file of three columns where first value is shRNA, second value is gene name and third value is sequence. |
output |
Character. Optional. If a character string of length one is supplied, it is
stripped of file extension and appended |
Value
Returns link to file of the library, which has been written to working directory or
path specified in output as a side effect.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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