PS: Simulated dataset of potential DMPs used in examples
In genomaths/MethylIT: Methylation Analysis Based on Signal Detection
PS R Documentation
Simulated dataset of potential DMPs used in examples
Description
Each individuals sample includes 10000 cytosine positions
Usage
PS
Format
PS is an object from class 'pDMP' carrying in the meta-columns the
following variables:
- p1
methylation level from the reference sample
- p2
methylation level from the treatment sample
- TV
the total variation distance (difference of
methylation levels)
- hdiv
Hellinger divergence
- wprob
the probabilities:
wprob = 1 - CDF probability
PS is an object from class 'pDMP' carrying the same
meta-columns as 'HD' (dataset) plus the probabilities: wprob = 1 - CDF
probability. PS object was obtained with function
getPotentialDIMP.
genomaths/MethylIT documentation built on Feb. 3, 2024, 1:24 a.m.
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| PS | R Documentation |
Simulated dataset of potential DMPs used in examples
Description
Each individuals sample includes 10000 cytosine positions
Usage
PS
Format
PS is an object from class 'pDMP' carrying in the meta-columns the following variables:
- p1
methylation level from the reference sample
- p2
methylation level from the treatment sample
- TV
the total variation distance (difference of methylation levels)
- hdiv
Hellinger divergence
- wprob
the probabilities:
wprob = 1 - CDF probability
PS is an object from class 'pDMP' carrying the same
meta-columns as 'HD' (dataset) plus the probabilities: wprob = 1 - CDF
probability. PS object was obtained with function
getPotentialDIMP.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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