calculate.moller.hetero: calculate.moller.hetero

Description Usage Arguments Author(s)

Description

Approximates the posterior distribution of Ne from a single genealogy at a regular grid of points using INLA package

Usage

1
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calculate.moller.hetero(coal.factor, s, event, lengthout, prec_alpha = 0.01,
  prec_beta = 0.01, E.log.zero = -100, alpha = NULL, beta = NULL)

Arguments

coal.factor

is a vector with coalescent times in increasing order

s

sampling times and coalescent times in increasing order

event

and indicator vector with 1 for coalescent times and 0 for sampling times that correspond to the s vector

lengthout

number of grid points

prec_alpha

alpha gamma hyperparameter of precision parameter for GP prior

prec_beta

beta gamma hyperparameter of precision parameter for GP prior

E.log.zero

internal

alpha

TODO

beta

TODO

Author(s)

Julia Palacios julia.pal.r@gmail.com


georgeshirreff/multiNe documentation built on May 17, 2019, 1:15 a.m.