sequence.wrapper: sequence.wrapper
In georgeshirreff/multiNe: Multiple Ne estimators

A wrapper function for the sequence simulator programs ms, seqgen, simSeq, and PhyloSim.

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sequence.wrapper(n = 10, L = 10, method = "", ms.args = NULL,
  tree = NULL, pi.n = 0.25, kappa = "", outfile = "out",
  ancseq = NULL, rate.in = 1)

`n`	number of sequences
`L`	length of sequence
`method`	choice of sequence simulation
`ms.args`	arguments passed to ms
`tree`	tree of format phylo
`outfile`	name of the file that writes out

Writes out sequences in phylip format to your working directory.

Rebecca Harris <rbharris@uw.edu>

1	library(phyclust)

georgeshirreff/multiNe documentation built on May 17, 2019, 1:15 a.m.

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