genObj: varNe_point
In georgeshirreff/multiNe: Multiple Ne estimators
Description
Usage
Arguments
Format
Value
Author(s)
Examples
Description
Calculates population size from a genind object by calculating the variance of allele frequencies between generations.
The variance F is inversely proportional to the effective population size Ne.
This function calculates F based on Jorde and Ryman 2007. They state hat low frequency alleles are not problematic / do not bias Ne estimates, thus they are not removed here.
Usage
1
Arguments
genObj
A genind object with years as populations.
Format
An object of class character of length 1.
Value
a vector with
Author(s)
Christine Ewers-Saucedo <ewers.christine@gmail.com>
Examples
1
library(adegenet)
georgeshirreff/multiNe documentation built on May 17, 2019, 1:15 a.m.
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Description Usage Arguments Format Value Author(s) Examples
Description
Calculates population size from a genind object by calculating the variance of allele frequencies between generations.
The variance F is inversely proportional to the effective population size Ne.
This function calculates F based on Jorde and Ryman 2007. They state hat low frequency alleles are not problematic / do not bias Ne estimates, thus they are not removed here.
Usage
1 |
Arguments
genObj |
A genind object with years as populations. |
Format
An object of class character of length 1.
Value
a vector with
Author(s)
Christine Ewers-Saucedo <ewers.christine@gmail.com>
Examples
1 | library(adegenet)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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