getFeatures-method: getFeatures

In ggloor/ALDEx_bioc: Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account

getFeatures

Description

Returns the features as a vector, for an aldex.clr object.

Usage

getFeatures(.object)

Arguments

.object

A aldex.clr object.

Details

Returns the features from the first sample and first Monte-Carlo replicate as a vector, for an aldex.clr object. Used only for troubleshooting purposes.

Value

A vector of features.

See Also

aldex.clr

Examples

data(selex)
    #subset for efficiency
    selex <- selex[1201:1600,]
conds <- c(rep("NS", 7), rep("S", 7))
x <- aldex.clr(selex, conds, mc.samples = 2, denom="all", verbose = FALSE)
features <- getFeatures(x)

ggloor/ALDEx_bioc documentation built on Oct. 31, 2023, 1:13 a.m.