numMCInstances-method: numMCInstances

In ggloor/ALDEx_bioc: Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account

numMCInstances

Description

Returns the number of Monte Carle Dirichlet instances generated for analysis, for an aldex.clr object.

Usage

  numMCInstances(.object)

Arguments

.object

A aldex.clr object.

Details

Returns the number of Monte Carle Dirichlet instances generated for analysis.

Value

A numeric representing the number of Monte Carle Dirichlet instances generated for analysis.

See Also

aldex.clr

Examples

data(selex)
    #subset for efficiency
    selex <- selex[1201:1600,]
conds <- c(rep("NS", 7), rep("S", 7))
x <- aldex.clr(selex, conds, mc.samples = 2, denom = "all", verbose = FALSE)
numInstances <- numMCInstances(x)

ggloor/ALDEx_bioc documentation built on Oct. 31, 2023, 1:13 a.m.