arrangeCompletenessOutput: This function arrange the completeness output of the...
In giangnguyen0709/fCAT: fCAT

This function arrange the completeness output of the interested genome into the corresponding folder in the output folder

arrangeCompletenessOutput(
  completenessOutput,
  output,
  coreSet,
  genomeName,
  scoreMode
)

`output`	The directory which contains the output directory
`coreSet`	The name of the interested core set. The core directory can contains more than one core set and the user must specify the interested core set. The core set will be stored in the folder core_orthologs in subfolder, specify them by the name of the subfolder
`genomeName`	the name of the interested genome
`scoreMode`	the mode determines the method to scoring the founded ortholog and how to classify them. Choices: 1, 2, 3, "len"
`completenessOuput`	a list contains the completeness output. The full table, missing table and the ignored table