downloadUniChem: downloadUniChem

In girke-lab/drugTargetInteractions: Drug-Target Interactions

downloadUniChem

Description

Downloads UniChem compound ID mappings from https://www.ebi.ac.uk/unichem/ucquery/listSources. Mappings are downloaded for DrugBank, PubChem, and ChEBI.

Usage

downloadUniChem(rerun=TRUE, config=genConfig())

Arguments

rerun	If true, downloads the files, else does nothing.
config	General configuration. See genConfig.

Value

Generates the following output files: "src1src2.txt.gz", "src1src22.txt.gz", and "src1src7.txt.gz". These correspond to mappings from ChEMBL to DrugBank, PubChem, and ChEBI, respectivly.

Author(s)

Thomas Girke

References

https://www.ebi.ac.uk/unichem/ucquery/listSources

See Also

drugTargetAnnotTable

Examples

	downloadUniChem(rerun=TRUE)

girke-lab/drugTargetInteractions documentation built on Oct. 10, 2022, 10:35 p.m.