transformTTD: transformTTD

In girke-lab/drugTargetInteractions: Drug-Target Interactions

transformTTD

Description

Integration with Therapeutic Target Database (TTD). This function downloads a data file from idrblab.org and returns it as a data frame.

Usage

transformTTD(ttdfile=file.path(config$downloadPath,"TTD_IDs.txt"), redownloadTTD=TRUE,config=genConfig()) 

Arguments

ttdfile	The name of the output file to write the downloaded file to.
redownloadTTD	If true, data file will be downloaded again. If false, we assume the file already exists at ttdfile.
config	General configuration. See genConfig.

Value

Returns a data frame with TTD data in it.

Author(s)

Thomas Girke

Examples

		ttd=tryCatch(
			transformTTD(),
			error=function(e){
				message("Failed to download TTD file, please try again later")
			}
		)

girke-lab/drugTargetInteractions documentation built on Oct. 10, 2022, 10:35 p.m.