subtrees: All subtrees of a Phylogenetic Tree
In gjuggler/ape: Analyses of Phylogenetics and Evolution

Description Usage Arguments Value Author(s) See Also Examples

This function returns a list of all the subtrees of a phylogenetic tree.

1	subtrees(tree, wait=FALSE)

`tree`	an object of class `"phylo"`.
`wait`	a logical indicating whether the node beeing processed should be printed (useful for big phylogenies).

subtrees returns a list of trees of class "phylo" and returns invisibly for each subtree a list with the following components:

`tip.label`
`node.label`
`Ntip`
`Nnode`

Damien de Vienne damien.de-vienne@u-psud.fr

zoom, subtreeplot for functions extracting particular subtrees.

### Random tree with 12 leaves
phy<-rtree(12)
par(mfrow=c(4,3))
plot(phy, sub="Complete tree")

### Extract the subtrees
l<-subtrees(phy)

### plot all the subtrees
for (i in 1:11) plot(l[[i]], sub=paste("Node", l[[i]]$node.label[1]))
par(mfrow=c(1,1))