predict_fragment_size-VaeModel-Vplots-method: predicted_fragment_size

In gongx030/seatac: ATAC-seq V-plot analysis

predicted_fragment_size

Description

Predict fragment size at the center of the Vplot

Usage

## S4 method for signature 'VaeModel,Vplots'
predict_fragment_size(model, x, batch_size = 256L, width = 100L, ...)

Arguments

model	a trained VaeModel object
x	a Vplots object
batch_size	Batch size (default: 256L)
width	Central width (in bp) for computing fragment size disstribution (default: 100L)
...	Other arguments passed to prepare_data.

Value

a Vplots object

Author(s)

Wuming Gong ([e-mail])

gongx030/seatac documentation built on April 15, 2023, 5:53 a.m.