read_vplot-GRangesList-character-BSgenome-method: Read the V-plot
In gongx030/seatac: ATAC-seq V-plot analysis
read_vplot,GRangesList,character,BSgenome-method R Documentation
Read the V-plot
Description
Read the V-plot from BAM files within a set of genomic regions
Usage
## S4 method for signature 'GRangesList,character,BSgenome'
read_vplot(x, filenames, genome, ...)
Arguments
x
a GRangesList object that define a set of genomic regions.
filenames
BAM file names
genome
a BSgenome object
...
Additional arguments for read_vplot('GRanges', 'character', 'BSgenome', ...)
Value
a VplotsList object
Author(s)
Wuming Gong (gongx030@umn.edu)
gongx030/seatac documentation built on April 15, 2023, 5:53 a.m.
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| read_vplot,GRangesList,character,BSgenome-method | R Documentation |
Read the V-plot
Description
Read the V-plot from BAM files within a set of genomic regions
Usage
## S4 method for signature 'GRangesList,character,BSgenome'
read_vplot(x, filenames, genome, ...)
Arguments
x |
a GRangesList object that define a set of genomic regions. |
filenames |
BAM file names |
genome |
a BSgenome object |
... |
Additional arguments for read_vplot('GRanges', 'character', 'BSgenome', ...) |
Value
a VplotsList object
Author(s)
Wuming Gong (gongx030@umn.edu)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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