read_bam-character-GRanges-BSgenome-method: Read BAM file
In gongx030/seatac: ATAC-seq V-plot analysis
read_bam,character,GRanges,BSgenome-method R Documentation
Read BAM file
Description
Read the aligned paired-end reads over the given peaks.
Usage
## S4 method for signature 'character,GRanges,BSgenome'
read_bam(filename, peaks, genome)
Arguments
filename
BAM file names
peaks
a GRange object that define a set of genomic regions.
genome
a BSgenome for genome information
Author(s)
Wuming Gong (gongx030@umn.edu)
gongx030/seatac documentation built on April 15, 2023, 5:53 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| read_bam,character,GRanges,BSgenome-method | R Documentation |
Read BAM file
Description
Read the aligned paired-end reads over the given peaks.
Usage
## S4 method for signature 'character,GRanges,BSgenome'
read_bam(filename, peaks, genome)
Arguments
filename |
BAM file names |
peaks |
a GRange object that define a set of genomic regions. |
genome |
a BSgenome for genome information |
Author(s)
Wuming Gong (gongx030@umn.edu)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.