ave.segmean: Obtain the average weighted segment mean log2 ratios from...
In gonzolgarcia/svcnvplus: Integrative analyses of CNV segmentation and SV variant calls
Description
Usage
Arguments
Value
Examples
View source: R/cnv.freq.plot.r
View source: R/segment.means.r
Description
Obtain the average weighted segment mean log2 ratios from each sample within a CNV segmentaton data.frame
Obtain the average weighted segment mean log2 ratios from each sample within a CNV segmentaton data.frame
Usage
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ave.segmean(cnv)
ave.segmean(cnv)
Arguments
cnv
(S4) an object of class svcnvio containing data type 'cnv' validated by validate.cnv
Value
(numeric) a vector containing the weighted average logR from segmented data
(numeric) a vector containing the weighted average logR from segmented data
Examples
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cnv <- validate.cnv(segdat_lung_ccle)
ave.segmean(cnv)
cnv <- validate.cnv(segdat_lung_ccle)
ave.segmean(cnv)
gonzolgarcia/svcnvplus documentation built on March 4, 2020, 6:02 p.m.
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Description Usage Arguments Value Examples
View source: R/cnv.freq.plot.r View source: R/segment.means.r
Description
Obtain the average weighted segment mean log2 ratios from each sample within a CNV segmentaton data.frame
Obtain the average weighted segment mean log2 ratios from each sample within a CNV segmentaton data.frame
Usage
1 2 3 | ave.segmean(cnv)
ave.segmean(cnv)
|
Arguments
cnv |
(S4) an object of class svcnvio containing data type 'cnv' validated by validate.cnv |
Value
(numeric) a vector containing the weighted average logR from segmented data
(numeric) a vector containing the weighted average logR from segmented data
Examples
1 2 3 4 5 | cnv <- validate.cnv(segdat_lung_ccle)
ave.segmean(cnv)
cnv <- validate.cnv(segdat_lung_ccle)
ave.segmean(cnv)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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