get.DEGs: Get A List Of Differentially Expressed Genes
In goushixue/QRseq: Quickly RNA-seq Analysis Platform
get.DEGs R Documentation
Get A List Of Differentially Expressed Genes
Description
Get A List Of Differentially Expressed Genes
Usage
get.DEGs(dds, ctrl, treat, p.adjust = 0.05, abs.lfc = 1, save = FALSE)
Arguments
dds
object of produced by DESeq
ctrl
Control group
treat
TreatMent groups
p.adjust
Adjusted P-values
abs.lfc
Log2 FoldChange Abs values
save
save DEG List to Local Directory
Value
DEG List
goushixue/QRseq documentation built on July 9, 2023, 9:28 a.m.
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| get.DEGs | R Documentation |
Get A List Of Differentially Expressed Genes
Description
Get A List Of Differentially Expressed Genes
Usage
get.DEGs(dds, ctrl, treat, p.adjust = 0.05, abs.lfc = 1, save = FALSE)
Arguments
dds |
object of produced by DESeq |
ctrl |
Control group |
treat |
TreatMent groups |
p.adjust |
Adjusted P-values |
abs.lfc |
Log2 FoldChange Abs values |
save |
save DEG List to Local Directory |
Value
DEG List
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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