remove.Batch: Remove batch effects from data

In goushixue/QRseq: Quickly RNA-seq Analysis Platform

Remove batch effects from data

Description

Remove batch effects from data

Usage

remove.Batch(
  expr.data,
  designTable,
  batch = "batch",
  batch2 = NULL,
  design = "condition",
  method = "ComBat"
)

Arguments

expr.data	expression data matrix
designTable	experiment design table
batch	key words for batch factors
design	unknown, conditions ?
method	methods used to correct batch effects

goushixue/QRseq documentation built on July 9, 2023, 9:28 a.m.