assemble_biopax_conversion_chuncks | Assemble Files from BioPAX Conversion Process |
check_biopax | Check BioPAX by Plotting Certain Pathways |
extract_biopax_interactions | Extract Pathway Interactions |
extract_biopax_interactions_vect | Extract BioPAX Interactions |
interactions_df_to_biopax_dt | Convert Interactions Dataframe into BioPAX Data Table |
MAIN_biopax_comparison | MAIN - Compare BioPAX Objects |
MAIN_combine_clean_biopax_unifyids | MAIN - Combine and Clean List of BioPAX Objects |
MAIN_flatten_biopax | MAIN - Flatten BioPAX |
MAIN_write_biopax | MAIN - Write BioPAX |
pathway2RegulatoryGraph_Rancho | Pathway to Regulatory Graph |
prepare_biopax_for_flattening | Prepare BioPAX for Flattening |
update_RIGconvertbiopax | Update RIGconvertbiopax from GitHub |
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