checkAlignmentFile: Manually check the alignment of consensus sequences using an...
In gschofl/DR2S: Dual redundant reference sequencing
Description
Usage
Arguments
Value
Description
Manually check the alignment of consensus sequences using an editor.
Usage
1
2
checkAlignmentFile(x, which = "mapFinal", where = 0,
editor = "xdg-open", openEditor = TRUE)
Arguments
x
A DR2S object.
which
Which stage of mapping to use. Either "mapFinal" (default) or
"mapIter".
where
Where to focus with the editor.
editor
Which editor to use. Either "xdg-open" (default) for standard
system editor, "subl" for sublime, "gvim" or "gedit"
openEditor
should the editor be opened or just create the files?
Value
The path to the newliy created alignment file to check the polished
consensus sequences.
gschofl/DR2S documentation built on May 17, 2019, 8:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Manually check the alignment of consensus sequences using an editor.
Usage
1 2 | checkAlignmentFile(x, which = "mapFinal", where = 0,
editor = "xdg-open", openEditor = TRUE)
|
Arguments
x |
A |
which |
Which stage of mapping to use. Either "mapFinal" (default) or "mapIter". |
where |
Where to focus with the editor. |
editor |
Which editor to use. Either "xdg-open" (default) for standard system editor, "subl" for sublime, "gvim" or "gedit" |
openEditor |
should the editor be opened or just create the files? |
Value
The path to the newliy created alignment file to check the polished consensus sequences.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.