createIgvConfigs: Create IGV xml config files for directly open the longread...

Description Usage Arguments

Description

Create IGV xml config files for directly open the longread and shortread mapping in an IGV session. It creates also ".sh" and ".bat" scripts for easy opening the IGV instance.

Usage

1
createIgvConfigs(x, position, map = "mapFinal", open = TRUE)

Arguments

x

A DR2S_ object.

position

The position where IGV focuses on startup.

map

Which mapping should be opened. One of "mapInit", "mapIter", "mapFinal" or "refine".

open

whether to open an IGV instance now.


gschofl/DR2S documentation built on May 17, 2019, 8:40 a.m.