createIgvConfigs: Create IGV xml config files for directly open the longread...
In gschofl/DR2S: Dual redundant reference sequencing
Description
Create IGV xml config files for directly open the longread and shortread
mapping in an IGV session. It creates also ".sh" and ".bat" scripts for
easy opening the IGV instance.
Usage
1
createIgvConfigs(x, position, map = "mapFinal", open = TRUE)
Arguments
x
A DR2S_ object.
position
The position where IGV focuses on startup.
map
Which mapping should be opened. One of "mapInit", "mapIter",
"mapFinal" or "refine".
open
whether to open an IGV instance now.
gschofl/DR2S documentation built on May 17, 2019, 8:40 a.m.
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Description
Create IGV xml config files for directly open the longread and shortread mapping in an IGV session. It creates also ".sh" and ".bat" scripts for easy opening the IGV instance.
Usage
1 | createIgvConfigs(x, position, map = "mapFinal", open = TRUE)
|
Arguments
x |
A |
position |
The position where IGV focuses on startup. |
map |
Which mapping should be opened. One of "mapInit", "mapIter", "mapFinal" or "refine". |
open |
whether to open an IGV instance now. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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