protein: Retrieve sequences and annotations from the Protein database

Description Usage Arguments Details Value

Description

Retrieve sequences and annotations from the Protein database

Usage

1
  protein(gi, rettype="fasta", retmax=25, parse=TRUE, ...)

Arguments

gi

‘GI’s or a valid NCBI search term.

rettype

Which type of data should be retrieved? ‘fasta’ (default), ‘gp’, ‘acc’, ‘seqid’, ‘ft’, ‘native’, or NULL (text ASN.1).

retmax

Maximal number of records to be retrieved (default: 25).

parse

Should the retrieved data be parsed?

...

Parameters passed on to the underlying efetch query.

Details

See the documentation at NCBI for more information.

Value

A gbRecord or an XStringSet instance.


gschofl/ncbi documentation built on May 17, 2019, 8:53 a.m.