getConnectance: Connectance
In hallucigenia-sparsa/seqtime: Time Series Analysis of Sequencing Data
View source: R/getConnectance.R
getConnectance R Documentation
Connectance
Description
Compute connectance of an interaction matrix.
Usage
getConnectance(A)
Arguments
A
an interaction matrix
Details
The connectance is defined as c=E/(N*(N-1)), where E is the number
of realized arcs (the number of non-zero entries in the interaction matrix)
and N*(N-1) the number of possible arcs.
The diagonal (self-arcs) is excluded.
Value
the connectance
Examples
A <- cbind(c(-1,0,1),c(0,-1,0),c(-1,0,-1))
x <- getConnectance(A)
hallucigenia-sparsa/seqtime documentation built on Jan. 9, 2023, 11:53 p.m.
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View source: R/getConnectance.R
| getConnectance | R Documentation |
Connectance
Description
Compute connectance of an interaction matrix.
Usage
getConnectance(A)
Arguments
A |
an interaction matrix |
Details
The connectance is defined as c=E/(N*(N-1)), where E is the number of realized arcs (the number of non-zero entries in the interaction matrix) and N*(N-1) the number of possible arcs. The diagonal (self-arcs) is excluded.
Value
the connectance
Examples
A <- cbind(c(-1,0,1),c(0,-1,0),c(-1,0,-1)) x <- getConnectance(A)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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