plotAbundanceVsNoisetypes: Plot taxon abundances classified by noise type
In hallucigenia-sparsa/seqtime: Time Series Analysis of Sequencing Data
View source: R/plotAbundanceVsNoisetypes.R
plotAbundanceVsNoisetypes R Documentation
Plot taxon abundances classified by noise type
Description
A box plot with taxon abundances is drawn for each noise type.
Usage
plotAbundanceVsNoisetypes(x, nt, sig = FALSE)
Arguments
x
a matrix with taxa as rows and samples as columns
nt
the noisetypes object generated for the matrix
sig
assess significance of difference between mean abundances with ANOVA and Tukey's post-hoc test
hallucigenia-sparsa/seqtime documentation built on Jan. 9, 2023, 11:53 p.m.
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View source: R/plotAbundanceVsNoisetypes.R
| plotAbundanceVsNoisetypes | R Documentation |
Plot taxon abundances classified by noise type
Description
A box plot with taxon abundances is drawn for each noise type.
Usage
plotAbundanceVsNoisetypes(x, nt, sig = FALSE)
Arguments
x |
a matrix with taxa as rows and samples as columns |
nt |
the noisetypes object generated for the matrix |
sig |
assess significance of difference between mean abundances with ANOVA and Tukey's post-hoc test |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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