gbflat2db: Read GenBank Flatfiles

Description Usage Arguments

View source: R/gbflat2db.R

Description

Read a GenBank flatfile, optionally filter its contents according to organism name and sequence length and return as an object of class DNAbin.

Usage

1
gbflat2db(file, taxa = NULL, megProj)

Arguments

file

A vector of mode "character" the path to the GenBank flatfile.

taxa

A vector of mode "character" giving the set of taxon names that will be selected from the availbale taxon names (ORGANISM entry in flatfile).

megProj

An object of class megapteraProj.


heibl/megaptera documentation built on Jan. 17, 2021, 3:34 a.m.