collapseSingles: Collapse Singleton Edges
In heibl/megaptera: MEGAPhylogeny Techniques in R
Description
Usage
Arguments
Value
See Also
View source: R/collapseSingles.R
Description
Collapse singleton edges in a phylogenetic tree. This function
is an alternative for collapse.singleton from the ape package that
will also work when ape::reorder(phy) throws an error. (And this
tends to happen often when taxonomic relationships are converted to trees.)
Usage
1
collapseSingles(phy)
Arguments
phy
An object of class "phylo".
Value
An object of class "phylo".
See Also
taxdump2phylo, comprehensiveGuidetree
heibl/megaptera documentation built on Jan. 17, 2021, 3:34 a.m.
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Description Usage Arguments Value See Also
View source: R/collapseSingles.R
Description
Collapse singleton edges in a phylogenetic tree. This function
is an alternative for collapse.singleton from the ape package that
will also work when ape::reorder(phy) throws an error. (And this
tends to happen often when taxonomic relationships are converted to trees.)
Usage
1 | collapseSingles(phy)
|
Arguments
phy |
An object of class |
Value
An object of class "phylo".
See Also
taxdump2phylo, comprehensiveGuidetree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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