msaBP_nj_tree: Neighbor joining BP Tree from MSA
In heibl/polenta: Multiple Sequence Alignment with PASTA and GUIDANCE
Description
Usage
Arguments
Value
View source: R/msaBP_nj_tree.R
Description
Estimate a neighbor joing tree from a multiple sequence alignment.
Usage
1
msaBP_nj_tree(msa, outgroup = "auto")
Arguments
msa
An object of class DNAbin or AAbin
containing aligned sequences of DNA or amino acids.
outgroup
A character string giving the taxon name to be used for
rooting; the default ("auto") chooses the first taxon.
Value
tree of class phylo
heibl/polenta documentation built on May 17, 2019, 3:22 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/msaBP_nj_tree.R
Description
Estimate a neighbor joing tree from a multiple sequence alignment.
Usage
1 | msaBP_nj_tree(msa, outgroup = "auto")
|
Arguments
msa |
An object of class |
outgroup |
A character string giving the taxon name to be used for
rooting; the default ( |
Value
tree of class phylo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.