API for heibl/polenta
Multiple Sequence Alignment with PASTA and GUIDANCE

Global functions
HoT	Man page Source code
Hot_GUIDANCE2	Man page Source code
add_msa	Source code
align_part_set	Man page Source code
centroidDecomposition	Man page Source code
confidence.heatmap	Man page Source code
decomposePhyloRooted	Man page Source code
deleteGaps	Man page Source code
equalSubtrees	Man page Source code
extractMSA	Man page Source code
filterMSA	Man page Source code
guidance	Man page Source code
guidance2	Man page Source code
guidanceSA	Man page Source code
msaBP	Man page Source code
msaBP_nj_tree	Man page Source code
msa_recode	Source code
msa_set_scoreR	Man page Source code
msa_set_scoreSA	Man page Source code
nChoosek	Source code
partitions	Man page Source code
pasta	Man page Source code
polenta	Man page Man page Source code
polenta-package	Man page
polentaAA	Man page
polentaAA-class	Man page
polentaDNA	Man page
polentaDNA-class	Man page
polenta_dev	Man page Source code
reappendScores	Man page Source code
reappendScores_dev	Man page Source code
reappendScores_gen_dev	Man page Source code
res_pair_hit	Source code
rev_DNA	Man page Source code
scores	Man page Source code
spanningTree	Man page Source code
transitivityMerge	Man page Source code