genePlotWeightedComp2: Relative expression of two groups using ratios
In hms-dbmi/brainmapr: Visualizes ISH gene expression data from the Allen Brain Atlas
Description
Usage
Arguments
Value
Description
Relative expression of two groups using ratios
Usage
1
genePlotWeightedComp2(gl1, weights1, gl2, weights2, expmat, gannot, plot = F)
Arguments
gl1
List of differentially expressed genes upregulated in cell group 1
weights1
List of weights corresponding to genes in gl1
gl2
List of differentially expressed genes upregulated in cell group 2
weights2
List of weights corresponding to genes in gl2
expmat
3D volume of expression
gannot
3D annotation of volume with structure IDs
plot
Boolean of whether to make 3D plot
Value
exp3D 3D volume of weighted expression for gene lists of interest
hms-dbmi/brainmapr documentation built on May 17, 2019, 4:35 p.m.
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Description Usage Arguments Value
Description
Relative expression of two groups using ratios
Usage
1 | genePlotWeightedComp2(gl1, weights1, gl2, weights2, expmat, gannot, plot = F)
|
Arguments
gl1 |
List of differentially expressed genes upregulated in cell group 1 |
weights1 |
List of weights corresponding to genes in |
gl2 |
List of differentially expressed genes upregulated in cell group 2 |
weights2 |
List of weights corresponding to genes in |
expmat |
3D volume of expression |
gannot |
3D annotation of volume with structure IDs |
plot |
Boolean of whether to make 3D plot |
Value
exp3D 3D volume of weighted expression for gene lists of interest
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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