dl_pert_signature: Download CMAP02/L1000 pert signature from S3
In hms-dbmi/drugseqr: GUI to Explore Single-Cell and Bulk RNA-Seq from Fastq to Pathways and Perturbations
View source: R/modules-path-utils.R
dl_pert_signature R Documentation
Download CMAP02/L1000 pert signature from S3
Description
Download CMAP02/L1000 pert signature from S3
Usage
dl_pert_signature(sig_path, pert_type)
Arguments
sig_path
Path to download file to.
pert_type
One of 'cmap', 'l1000_drugs', or 'l1000_genes'.
Value
NULL. Called for side effects.
Examples
data_dir <- tempdir()
sig_path <- file.path(data_dir, '0317956-0000_PC3_1e-06M_6h.rds')
dseqr:::dl_pert_signature(sig_path, pert_type = 'cmap')
hms-dbmi/drugseqr documentation built on Feb. 15, 2024, 10:38 p.m.
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View source: R/modules-path-utils.R
| dl_pert_signature | R Documentation |
Download CMAP02/L1000 pert signature from S3
Description
Download CMAP02/L1000 pert signature from S3
Usage
dl_pert_signature(sig_path, pert_type)
Arguments
sig_path |
Path to download file to. |
pert_type |
One of |
Value
NULL. Called for side effects.
Examples
data_dir <- tempdir()
sig_path <- file.path(data_dir, '0317956-0000_PC3_1e-06M_6h.rds')
dseqr:::dl_pert_signature(sig_path, pert_type = 'cmap')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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