identify_sc_files: Get 10X FastQ paths for a read type and sort by increasing...
In hms-dbmi/drugseqr: GUI to Explore Single-Cell and Bulk RNA-Seq from Fastq to Pathways and Perturbations
identify_sc_files R Documentation
Get 10X FastQ paths for a read type and sort by increasing lane number
Description
Get 10X FastQ paths for a read type and sort by increasing lane number
Usage
identify_sc_files(data_dir, read_type = "R1")
Arguments
data_dir
Path to folder with 10X fastq.gz scRNA-seq files
read_type
One of 'R1' or 'R2' for CB+UMI and read sequences respectively.
Value
Character vector of lane ordered paths to FastQ read type files.
hms-dbmi/drugseqr documentation built on June 24, 2024, 7:03 a.m.
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| identify_sc_files | R Documentation |
Get 10X FastQ paths for a read type and sort by increasing lane number
Description
Get 10X FastQ paths for a read type and sort by increasing lane number
Usage
identify_sc_files(data_dir, read_type = "R1")
Arguments
data_dir |
Path to folder with 10X fastq.gz scRNA-seq files |
read_type |
One of |
Value
Character vector of lane ordered paths to FastQ read type files.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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