load_kallisto_counts: Read kallisto/bustools market matrix and annotations
In hms-dbmi/drugseqr: GUI to Explore Single-Cell and Bulk RNA-Seq from Fastq to Pathways and Perturbations
load_kallisto_counts R Documentation
Read kallisto/bustools market matrix and annotations
Description
Read kallisto/bustools market matrix and annotations
Usage
load_kallisto_counts(data_dir)
Arguments
data_dir
Path to folder with 'genecount' directory which contains
'genes.mtx', 'genes.genes.txt', and 'genes.barcodes.txt' files generated
by kallisto/bustools.
Value
sparse dgTMatrix with barcodes in columns and genes in rows.
hms-dbmi/drugseqr documentation built on Feb. 15, 2024, 10:38 p.m.
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| load_kallisto_counts | R Documentation |
Read kallisto/bustools market matrix and annotations
Description
Read kallisto/bustools market matrix and annotations
Usage
load_kallisto_counts(data_dir)
Arguments
data_dir |
Path to folder with 'genecount' directory which contains 'genes.mtx', 'genes.genes.txt', and 'genes.barcodes.txt' files generated by kallisto/bustools. |
Value
sparse dgTMatrix with barcodes in columns and genes in rows.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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