theme_pubr: Publication ready theme

In hms-dbmi/drugseqr: GUI to Explore Single-Cell and Bulk RNA-Seq from Fastq to Pathways and Perturbations

Publication ready theme

Description

Create a publication ready theme. From package ggpubr.

Usage

theme_pubr(
  base_size = 12,
  base_family = "",
  border = FALSE,
  margin = TRUE,
  legend = c("top", "bottom", "left", "right", "none"),
  x.text.angle = 0
)

Arguments

base_size	base font size
base_family	base font family
border	logical value. Default is FALSE. If TRUE, add panel border.
margin	logical value. Default is TRUE. If FALSE, reduce plot margin.
legend	character specifying legend position. Allowed values are one of c("top", "bottom", "left", "right", "none"). Default is "top" side position. to remove the legend use legend = "none". Legend position can be also specified using a numeric vector c(x, y). In this case it is possible to position the legend inside the plotting area. x and y are the coordinates of the legend box. Their values should be between 0 and 1. c(0,0) corresponds to the "bottom left" and c(1,1) corresponds to the "top right" position. For instance use legend = c(0.8, 0.2).
x.text.angle	Rotation angle of x axis tick labels. Default value is 0. Use 90 for vertical text.
flip	logical. If TRUE, grid lines are added to y axis instead of x axis.

Examples

library(ggplot2)

p <- ggplot(mtcars, aes(x = wt, y = mpg)) +
   geom_point(aes(color = gear))

# Default plot
p

# Use theme_pubr()
p + dseqr:::theme_pubr()

hms-dbmi/drugseqr documentation built on Feb. 15, 2024, 10:38 p.m.