huebschm/YAPSA: Yet Another Package for Signature Analysis
This package provides functions and routines useful in the analysis of somatic signatures (cf. L. Alexandrov et al., Nature 2013). In particular, functions to perform a signature analysis with known signatures (LCD = linear combination decomposition) and a signature analysis on stratified mutational catalogue (SMC = stratify mutational catalogue) are provided.
Getting started
Browse package contents
Package details |
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| Author | Daniel Huebschmann, Zuguang Gu, Matthias Schlesner |
| Bioconductor views | BiologicalQuestion Clustering DNASeq GenomicVariation Sequencing SomaticMutation StatisticalMethod Visualization |
| Maintainer | Daniel Huebschmann <huebschmann.daniel@googlemail.com> |
| License | GPL-3 |
| Version | 0.99.10 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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