API for iaaka/visutils
QC, analyse and visualize visium

Global functions
applyTransforms	Man page Source code Source code
bandwidth.nrd.not0	Man page
barplotWithText	Man page Source code
calcColSums	Man page Source code
calcDistance2SpotSet	Man page Source code
calcDistance2border	Source code
calcSpotDistance	Man page Source code
char2col	Man page Source code
col2hex	Man page Source code
compareSets	Man page Source code
cropVisiumImage	Man page Source code Source code
defineJunction	Man page Source code
dist2ann	Source code Source code
dotPlot	Man page Source code
empty2tissueRatio	Source code Source code
enhanceImage	Man page Source code Source code
estimateDiffusion	Source code Source code
exogenousFraq	Source code Source code
fillBackground	Source code
findTissueBorder	Man page Source code Source code
first2Upper	Man page Source code
getCenters	Man page Source code
getColoursByDistance	Man page Source code
getConsensus	Man page Source code
getDiffFun	Source code Source code
getImageName	Source code
getLineWidth	Man page Source code
getMaxInxByFirstDD	Man page Source code Source code
getMeanSpotColor	Man page Source code Source code
getMeanSpotColor1	Man page Source code Source code
getNMFNormFs	Man page Source code
getNMFcl	Man page Source code
getRotations	Man page Source code Source code
getSilhouetteStat	Man page Source code
getWeightedMeanCols	Source code Source code
hist2D	Man page Source code
imageWithText	Man page Source code
isColors	Man page Source code
loadVisiumFrom10x	Man page Source code Source code
log10p1	Man page Source code
makeColorLenedCoordinates	Source code
makeDistFeatureSampleTable	Man page Source code
mean.by.bin	Source code Source code
mergePNG2PFD	Man page Source code
mergeSpots	Man page Source code
my.make.unique	Man page Source code
myLoad10X_Spatial	Man page Source code Source code
nmf2cl	Source code
nmfGetBest	Man page Source code
num2col	Man page Source code
number2bin	Man page Source code
overlayColours	Man page Source code
overlayTwoColours	Man page Source code
plotArea	Man page Source code
plotColorAnn	Man page Source code
plotColorLegend	Man page Source code
plotColorLegend2	Man page Source code
plotConditionsProfiles	Man page Source code
plotFeatureProfiles	Man page Source code
plotLine	Man page Source code
plotNMFCons	Man page Source code Source code
plotPanelLetter	Man page Source code
plotPointDensity	Man page Source code
plotTD.HM	Man page Source code
plotTiles	Source code
plotVisium	Man page Source code Source code
plotVisiumHex	Man page Source code Source code
plotVisiumImg	Man page Source code Source code
plotVisiumMultyColours	Man page Source code Source code
plotVisiumRect	Source code Source code
plotWithMeanTrend	Source code Source code
pointKde2d	Man page Source code
recycle	Man page Source code
removeExoRNA	Source code
removeExoRNA_	Source code
renameClustsBySize	Man page Source code
rnaNNLS	Source code Source code
rnaNNLS.by.ann	Source code Source code
rotateVisium	Man page Source code
scaleTo	Man page Source code
scaleVisiumImage	Man page Source code Source code
splitSub	Man page Source code
symbols.pie	Man page Source code Source code
testTDConditions	Man page Source code
trimQ	Man page Source code
weightedColourMeans	Man page Source code