get_beta: Extract beta and p-values of queried variant
In ichcha-m/cophescan: Adaptation of the Coloc Method for PheWAS
get_beta R Documentation
Extract beta and p-values of queried variant
Description
Extract beta and p-values of queried variant
Usage
get_beta(traits.dat, querysnpid, querytrait)
Arguments
traits.dat
list of coloc structured dataset
querysnpid
vector of querysnpid
querytrait
vector of querytrait names
Value
data.frame with one column named beta_plot: indicating beta direction (n/p) and another column named pval_plot with -log10(pval) of the queried variant
ichcha-m/cophescan documentation built on June 16, 2024, 1:39 a.m.
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| get_beta | R Documentation |
Extract beta and p-values of queried variant
Description
Extract beta and p-values of queried variant
Usage
get_beta(traits.dat, querysnpid, querytrait)
Arguments
traits.dat |
list of coloc structured dataset |
querysnpid |
vector of querysnpid |
querytrait |
vector of querytrait names |
Value
data.frame with one column named beta_plot: indicating beta direction (n/p) and another column named pval_plot with -log10(pval) of the queried variant
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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