Man pages for isglobal-brge/CNVassoc
Association analysis of CNVs and imputed SNPs incorporating uncertainty

A112Copy Number Variant intensity data (from CNVtools)
cnvCNV object
CNVassocAssociation analysis between a CNV and phenotype
CNVassoc-internalInternal CNVassoc functions
CNVtestTesting association between a CNV and phenotype
dataMLPAMLPA data
fastCNVassocFast association analysis between a CNV or imputed SNPs and...
fastCNVinterFast epistasis (pairwise interaction) analysis between two...
getProbsGet posterior probabilities from an object of class 'cnv' or...
getProbsRegionsGet posterior probabilities for blocks/regions
getPvalBHCorrected p values using Benjamini & Hochberg approach
getQualityScoreComputes a quality score for a CNV fit
multiCNVassocAssociation between several CNVs and disease
NeveCalledBreast Cancer aCGH data with CGHcall
NeveDataBreast Cancer aCGH data
NeveRegionsBreast Cancer aCGH data with CGHcall
plotSignalplots the intensities of a CNV univariate signal data
simCNVdataBinarySimulation of CNV and discrete traits
simCNVdataCaseConSimulation of CNV in a case-control study design
simCNVdataNormSimulation of CNV and quantitative traits
simCNVdataPoisSimulate Poisson data
simCNVdataWeibullSimulate of CNV and a right censored Weibull distributed...
SNPTESTCase-control data with SNPTEST format
isglobal-brge/CNVassoc documentation built on May 30, 2019, 9:48 p.m.