VizHeatmap: Creates Heatmap for gene set

Description Usage Arguments Author(s)

View source: R/viz.R

Description

Dynamically generates Seurat Heatmap for all genes in a given gene set as a PDF.

Usage

1
VizHeatmap(scrna, outfile, genes, heatmap.params = NULL)

Arguments

scrna

Seurat object.

outfile

Path for output PDF.

genes

Vector of genes to plot.

heatmap.params

List of keyword arguments to be passed to DoHeatmap. features and assay are already defined and will throw an error if passed.

Author(s)

Jared Andrews


j-andrews7/EZscRNA documentation built on Feb. 24, 2020, 10:37 a.m.