aa.comp: Amino Acid Composition

In jcaledo/ptm_0.1.1: Analyses of Protein Post-Translational Modifications

Description

Returns a table with the amino acid composition of the target protein.

Usage

aa.comp(target, uniprot = TRUE)

Arguments

target	a character string specifying the UniProt ID of the protein of interest or, alternatively, the sequence of that protein.
uniprot	logical, if TRUE the argument 'target' shoud be an ID.

Value

Returns a dataframe with the absolute frequency of each type of residue found in the target peptide.

Author(s)

Juan Carlos Aledo

See Also

is.at(), renum.pdb(), renum.meto(), renum(), aa.at()

Examples

aa.comp('MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQK', uniprot = FALSE)
aa.comp('P01009')

jcaledo/ptm_0.1.1 documentation built on April 4, 2020, 3:48 a.m.