find_top_cluster_markers: Find top cluster markers
In jdreyf/jdcbioinfo: Joslin Diabetes Center bioinformatics utilities
View source: R/find_top_cluster_markers.R
find_top_cluster_markers R Documentation
Find top cluster markers
Description
Find top cluster markers.
Usage
find_top_cluster_markers(
cluster.markers,
ntop = 5,
padj.cutoff = 0.05,
pct.cutoff = 0.25
)
Arguments
cluster.markers
Data.frame generated by Seurat FindAllMarkers
ntop
Number of top markers for each cluster
padj.cutoff
Cutoff of adjusted p-values
pct.cutoff
Cutoff of percentage of expressing cells
Value
Data.frame
jdreyf/jdcbioinfo documentation built on Feb. 12, 2025, 4:30 p.m.
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View source: R/find_top_cluster_markers.R
| find_top_cluster_markers | R Documentation |
Find top cluster markers
Description
Find top cluster markers.
Usage
find_top_cluster_markers(
cluster.markers,
ntop = 5,
padj.cutoff = 0.05,
pct.cutoff = 0.25
)
Arguments
cluster.markers |
Data.frame generated by Seurat FindAllMarkers |
ntop |
Number of top markers for each cluster |
padj.cutoff |
Cutoff of adjusted p-values |
pct.cutoff |
Cutoff of percentage of expressing cells |
Value
Data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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