make_gsea_cnet: Make cnets plot for a list of GSEA results
In jdreyf/jdcbioinfo: Joslin Diabetes Center bioinformatics utilities
View source: R/make_gsea_cnet.R
make_gsea_cnet R Documentation
Make cnets plot for a list of GSEA results
Description
Make cnet plots for the community-representing pathways
Usage
make_gsea_cnet(
gseaRes,
fc,
resolution = 1,
algorithm = "louvain",
label = "Z-scores"
)
Arguments
gseaRes
a named list of GSEA object
fc
a list of Z-scores with the same names as gseaRes
resolution
optional resolution parameter
algorithm
either "louvain" or "leiden"
label
label for color bar
Value
a list of ggplot2 objects.
jdreyf/jdcbioinfo documentation built on Feb. 12, 2025, 4:30 p.m.
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View source: R/make_gsea_cnet.R
| make_gsea_cnet | R Documentation |
Make cnets plot for a list of GSEA results
Description
Make cnet plots for the community-representing pathways
Usage
make_gsea_cnet(
gseaRes,
fc,
resolution = 1,
algorithm = "louvain",
label = "Z-scores"
)
Arguments
gseaRes |
a named list of GSEA object |
fc |
a list of Z-scores with the same names as gseaRes |
resolution |
optional resolution parameter |
algorithm |
either "louvain" or "leiden" |
label |
label for color bar |
Value
a list of ggplot2 objects.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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