jd_deseq: Calculates differential abundance statistics based on DESeq2
In jdwiyanto/mbiome: A convenient wrapper to visualise and run core analyses for multi-variable microbiome data
Description
Calculates differential abundance statistics based on DESeq2
Usage
1
Arguments
ps
A phyloseq object
var
A variable to analyse
threshold
A number to filter features with less than the chosen number log-fold changes. Defaults to 1.5
jdwiyanto/mbiome documentation built on April 18, 2021, 3:31 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Calculates differential abundance statistics based on DESeq2
Usage
1 |
Arguments
ps |
A phyloseq object |
var |
A variable to analyse |
threshold |
A number to filter features with less than the chosen number log-fold changes. Defaults to 1.5 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.