jd_permanova: Calculates PERMANOVA
In jdwiyanto/mbiome: A convenient wrapper to visualise and run core analyses for multi-variable microbiome data
Description
Usage
Arguments
Value
Description
Calculates PERMANOVA
Usage
1
jd_permanova(ps, var, strata = NA, mtd = "euclidean")
Arguments
ps
A phyloseq object – raw reads
var
A variable(s) to test for PERMANOVA
strata
A variable to stratify the PERMANOVA calculation. Defaults to NA
Value
A list of PERMANOVA output
jdwiyanto/mbiome documentation built on April 18, 2021, 3:31 a.m.
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Description Usage Arguments Value
Description
Calculates PERMANOVA
Usage
1 | jd_permanova(ps, var, strata = NA, mtd = "euclidean")
|
Arguments
ps |
A phyloseq object – raw reads |
var |
A variable(s) to test for PERMANOVA |
strata |
A variable to stratify the PERMANOVA calculation. Defaults to NA |
Value
A list of PERMANOVA output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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