MPP.PP.groups.fn: Summarise, for a set of diseases, posterior probabilities and...

In jennasimit/MTFM: Multinomial fine-mapping

Description

Summarise, for a set of diseases, posterior probabilities and marginal posterior probabilities by SNP groups

Usage

MPP.PP.groups.fn(MPP, pp, dis, shared, snpGroups)

Arguments

MPP	Matrix of marginal probabilities for a set of diseases and kappa values; output as MPP from PPmarginal.multiple.fn
pp	List consisting of posterior probability matrices for each disease; output as PP from PPmarginal.multiple.fn
dis	Vector of disease names
shared	Vector of kappa values
snpGroups	List of SNP groups for region

Value

List consisting of mppGS: matrix of marginal probabilities by SNP groups; gPP: list of PP matrices by SNP groups

Author(s)

Jenn Asimit

jennasimit/MTFM documentation built on Aug. 15, 2019, 6:14 p.m.