Description Usage Arguments Value
SNP groups that have marginal PP of inclusion (MPPi) above a threshold for some disease
1 | make.snp.groups.fn(groups, rdis, mppi.thr = 0.05)
|
groups |
List consisting of groups: SNP groups formed for a set of diseases; summary: for each group the min r2, max r2 and MPPi for each disease is given; r2: matrix of r2 between each pair of SNPs |
rdis |
Full set of diseases for fine-mapping |
mppi.thr |
Threshold for retaining SNP groups that have MPPi > mppi.thr for some disease in rdis |
List of SNP groups that summarise fine-mapping results
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