Description Usage Arguments Value Author(s)
Plot a matrix of probabilities, where rows are kappa values and columns are SNPs (MPP matrix) or models (PP matrix)
1 | PP.plot.fn(pp, pthr)
|
pp |
Matrix of probabilities: rows are kappa values; columns are SNPs (MPP matrix) or models (PP matrix) |
pthr |
Threshold for keeping probabilities from SNPs/models that are greater than pthr for at least one kappa value |
Matrix of probabilites that are plotted (only SNPs/models with MPP/PP > pthr at some kappa value are retained)
Jenn Asimit
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