pp.filter.fn: Filter probability matrix output by threshold
In jennasimit/MTFM: Multinomial fine-mapping
Description
Usage
Arguments
Value
Description
Filter probability matrix output by threshold
Usage
1
pp.filter.fn(pp, pthr)
Arguments
pp
Matrix of probabilities: rows are kappa values; columns are SNPs (MPP matrix) or models (PP matrix)
pthr
Threshold for keeping probabilities from SNPs/models that are greater than pthr for at least one kappa value
Value
Probability matrix with the same rows as input matrix, but only columns with the maximum probability greater than the threshold are retained.
jennasimit/MTFM documentation built on Aug. 15, 2019, 6:14 p.m.
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Description Usage Arguments Value
Description
Filter probability matrix output by threshold
Usage
1 | pp.filter.fn(pp, pthr)
|
Arguments
pp |
Matrix of probabilities: rows are kappa values; columns are SNPs (MPP matrix) or models (PP matrix) |
pthr |
Threshold for keeping probabilities from SNPs/models that are greater than pthr for at least one kappa value |
Value
Probability matrix with the same rows as input matrix, but only columns with the maximum probability greater than the threshold are retained.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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