fix_het_alleles: correct alt alleles which have been encoded as an IUPAC...
In jeremymcrae/publishedDeNovos: Published De Novos Dataset from Developmental Disorder Sequencing Studies
Description
Usage
Arguments
Value
Description
Sometimes the de novo variants from studies provide alt alleles as "R", or
"Y", which indicate ambigous bases. We can identify the correct alt base by
comparison with the reference allele.
Usage
1
Arguments
variants
data frame of variants
Value
a data frame with chrom, start_pos, end_pos and allele columns.
jeremymcrae/publishedDeNovos documentation built on May 19, 2019, 5:08 a.m.
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Description Usage Arguments Value
Description
Sometimes the de novo variants from studies provide alt alleles as "R", or "Y", which indicate ambigous bases. We can identify the correct alt base by comparison with the reference allele.
Usage
1 |
Arguments
variants |
data frame of variants |
Value
a data frame with chrom, start_pos, end_pos and allele columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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