fix_sub_alleles: fix substitution allele codes
In jeremymcrae/publishedDeNovos: Published De Novos Dataset from Developmental Disorder Sequencing Studies
Description
Usage
Arguments
Value
Description
fix the allele column for variants with allele columns that are structured
like "sub(G->T)" (the "->" translates to ">", and sub(G->T), this is
an excel to R conversion issue. Perhaps it is unicode from excel?
Usage
1
fix_sub_alleles(variants, allele_column)
Arguments
variants
data frame of variants
allele_column
name of column containing allele information
Value
a data frame with chrom, start_pos, end_pos and allele columns.
jeremymcrae/publishedDeNovos documentation built on May 19, 2019, 5:08 a.m.
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Description Usage Arguments Value
Description
fix the allele column for variants with allele columns that are structured like "sub(G->T)" (the "->" translates to ">", and sub(G->T), this is an excel to R conversion issue. Perhaps it is unicode from excel?
Usage
1 | fix_sub_alleles(variants, allele_column)
|
Arguments
variants |
data frame of variants |
allele_column |
name of column containing allele information |
Value
a data frame with chrom, start_pos, end_pos and allele columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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